HBV Target gene Detail Information

> GARIN1B Gene Search Result


Gene Information
Gene Name GARIN1B
Gene ID 84691
Gene Full Name golgi associated RAB2 interactor 1B
Gene Alias FAM137A|FAM71F1|GARI-L1|GARIL1|NYD-SP18
Transcripts ENSG00000135248
Virus HBV
Gene Type protein-coding
HPA Location Info Nuclear bodies, Golgi apparatus;Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96KD3
HGNC ID HGNC:30704
OMIM ID 619905
Summary Predicted to be involved in acrosome assembly and acrosome reaction. Predicted to be located in Golgi apparatus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [GARIN1B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004605 chr7 25 39 11 75 View

Target gene [GARIN1B] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - GARIN1B peak across samples

Peak Plot

> Dataset: GSE68402 - GARIN1B peak across samples

Peak Plot

> Dataset: GSE270130 - GARIN1B peak across samples

Peak Plot

> Dataset: GSE131257 - GARIN1B peak across samples

Peak Plot