HPV Target gene Detail Information

> GET1 Gene Search Result


Gene Information
Gene Name GET1
Gene ID 7485
Gene Full Name guided entry of tail-anchored proteins factor 1
Gene Alias CHD5|WRB
Transcripts ENSG00000182093
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O00258
HGNC ID HGNC:12790
OMIM ID 602915
Summary This gene is located in the candidate region for congenital heart disease (CHD) in Down syndrome (DS). It encodes a basic protein that functions as a receptor that promotes insertion of tail-anchored proteins in the endoplasmic reticulum membrane. This gene is located at a maternally-methylated differentially methylated region (DMR); however, its transcription may be biallelic, not imprinted. Alternative splicing results in different transcript variants. A pseudogene has been defined on chromosome 4. [provided by RefSeq, Apr 2017]
Target gene [GET1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015712 chr21 16 37 5 58 View

Target gene [GET1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - GET1 peak across samples

Peak Plot


> Dataset: GSE143026 - GET1 peak across samples

Peak Plot