HBV Target gene Detail Information

> GMDS-DT Gene Search Result


Gene Information
Gene Name GMDS-DT
Gene ID 100508120
Gene Full Name GMDS divergent transcript
Gene Alias GMDS-AS1
Transcripts ENSG00000250903
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:48993
lncRNASNP2 ID GMDS-DT
Target gene [GMDS-DT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016765 chr6 1 0 0 1 View
1041471 chr6 25 3 0 28 View

Target gene [GMDS-DT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - GMDS-DT peak across samples

Peak Plot

> Dataset: GSE68402 - GMDS-DT peak across samples

Peak Plot

> Dataset: GSE131257 - GMDS-DT peak across samples

Peak Plot

> Dataset: GSE270130 - GMDS-DT peak across samples

Peak Plot