HPV Target gene Detail Information

> GMDS-DT Gene Search Result


Gene Information
Gene Name GMDS-DT
Gene ID 100508120
Gene Full Name GMDS divergent transcript
Gene Alias GMDS-AS1
Transcripts ENSG00000250903
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:48993
lncRNASNP2 ID GMDS-DT
Target gene [GMDS-DT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011978 chr6 4 0 0 4 View

Target gene [GMDS-DT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - GMDS-DT peak across samples

Peak Plot

> Dataset: GSE143026 - GMDS-DT peak across samples

Peak Plot