HTLV1 Target gene Detail Information

> GOLGA6B Gene Search Result


Gene Information
Gene Name GOLGA6B
Gene ID 55889
Gene Full Name golgin A6 family member B
Gene Alias GOLGA|GOLGA6D
Transcripts ENSG00000215186
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;Nucleoplasm, Centrosome;
Membrane Info Predicted intracellular proteins
Uniport_ID A6NDN3
HGNC ID HGNC:32205
Summary This gene is found in a large, low copy repeat sequence or duplicon that is found in multiple copies, which are greater than 90% similar, on chromosome 15. Duplicons are associated with deletions, inversions and other chromosomal rearrangements that underlie genomic disease. This gene is a member of the golgin gene family, whose protein products localize to the Golgi apparatus. The majority of the related gene copies are thought to be transcribed pseudogenes. It is not known whether this gene is a pseudogene or if it encodes a golgin protein. [provided by RefSeq, Jul 2008]
Target gene [GOLGA6B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005885 chr15 44 31 4 79 View

Target gene [GOLGA6B] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip