HBV Target gene Detail Information

> GRIN3A Gene Search Result


Gene Information
Gene Name GRIN3A
Gene ID 116443
Gene Full Name glutamate ionotropic receptor NMDA type subunit 3A
Gene Alias GluN3A|NMDAR-L|NMDAR3A|NR3A
Transcripts ENSG00000198785
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info FDA approved drug targets, Predicted membrane proteins
Uniport_ID Q8TCU5
HGNC ID HGNC:16767
OMIM ID 606650
Summary This gene encodes a subunit of the N-methyl-D-aspartate (NMDA) receptors, which belong to the superfamily of glutamate-regulated ion channels, and function in physiological and pathological processes in the central nervous system. This subunit shows greater than 90% identity to the corresponding subunit in rat. Studies in the knockout mouse deficient in this subunit suggest that this gene may be involved in the development of synaptic elements by modulating NMDA receptor activity. [provided by RefSeq, Jul 2008]
Target gene [GRIN3A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003425 chr9 12 78 44 134 View
1003426 chr9 12 78 44 134 View
1006805 chr9 13 19 2 34 View
1006962 chr9 11 19 2 32 View
1010529 chr9 8 4 0 12 View
1010547 chr9 8 4 0 12 View

Target gene [GRIN3A] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - GRIN3A peak across samples

Peak Plot

> Dataset: GSE68402 - GRIN3A peak across samples

Peak Plot

> Dataset: GSE270130 - GRIN3A peak across samples

Peak Plot

> Dataset: GSE100400 - GRIN3A peak across samples

Peak Plot

> Dataset: GSE131257 - GRIN3A peak across samples

Peak Plot