HBV Target gene Detail Information

> HCN1 Gene Search Result


Gene Information
Gene Name HCN1
Gene ID 348980
Gene Full Name hyperpolarization activated cyclic nucleotide gated potassium channel 1
Gene Alias BCNG-1|BCNG1|DEE24|EIEE24|GEFSP10|HAC-2
Transcripts ENSG00000164588
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID O60741
HGNC ID HGNC:4845
OMIM ID 602780
Summary The membrane protein encoded by this gene is a hyperpolarization-activated cation channel that contributes to the native pacemaker currents in heart and neurons. The encoded protein can homodimerize or heterodimerize with other pore-forming subunits to form a potassium channel. This channel may act as a receptor for sour tastes. [provided by RefSeq, Oct 2011]
Target gene [HCN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007953 chr5 10 7 6 23 View
1007954 chr5 10 7 6 23 View
1016374 chr5 1 0 0 1 View
1019445 chr5 0 0 0 0 View
1019861 chr5 0 0 0 0 View
1020339 chr5 7 19 4 30 View
1021243 chr5 1 0 0 1 View
1043053 chr5 6 0 0 6 View

Target gene [HCN1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - HCN1 peak across samples

Peak Plot

> Dataset: GSE68402 - HCN1 peak across samples

Peak Plot

> Dataset: GSE270130 - HCN1 peak across samples

Peak Plot

> Dataset: GSE100400 - HCN1 peak across samples

Peak Plot

> Dataset: GSE131257 - HCN1 peak across samples

Peak Plot