HPV Target gene Detail Information

> IGKV1-6 Gene Search Result


Gene Information
Gene Name IGKV1-6
Gene ID 28943
Gene Full Name immunoglobulin kappa variable 1-6
Gene Alias IGKV16|L11
Transcripts ENSG00000239855
Virus HPV
Gene Type other
HPA Location Info Immunoglobulin genes;
Membrane Info Immunoglobulin genes, Predicted secreted proteins
Uniport_ID A0A0C4DH72
HGNC ID HGNC:5742
Summary Predicted to be involved in immune response. Predicted to be located in extracellular region and plasma membrane. Predicted to be part of immunoglobulin complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [IGKV1-6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5013209 chr2 23 17 6 46 View

Target gene [IGKV1-6] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
S
  GSE197461 		scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
S
  GSE226620 		scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE197461 - Gene expression in cell subsets

> Dataset: GSE226620 - Gene expression in cell subsets