HBV Target gene Detail Information

> IGSF11 Gene Search Result


Gene Information
Gene Name IGSF11
Gene ID 152404
Gene Full Name immunoglobulin superfamily member 11
Gene Alias BT-IgSF|BTIGSF|CT119|CXADRL1|Igsf13|VSIG3
Transcripts ENSG00000144847
Virus HBV
Gene Type protein-coding
HPA Location Info Cell Junctions;Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5DX21
HGNC ID HGNC:16669
OMIM ID 608351
Summary IGSF11 is an immunoglobulin (Ig) superfamily member that is preferentially expressed in brain and testis. It shares significant homology with coxsackievirus and adenovirus receptor (CXADR; MIM 602621) and endothelial cell-selective adhesion molecule (ESAM).[supplied by OMIM, Apr 2005]
Target gene [IGSF11] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004932 chr3 53 12 0 65 View
1014409 chr3 3 0 0 3 View
1015236 chr3 2 0 0 2 View
1020434 chr3 0 0 0 0 View
1022845 chr3 53 12 0 65 View
1022965 chr3 2 0 0 2 View
1022966 chr3 3 0 0 3 View
1042783 chr3 10 1 0 11 View
1042784 chr3 70 24 3 97 View

Target gene [IGSF11] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - IGSF11 expression across samples

Volcano Plot

Bar Plot