HTLV1 Target gene Detail Information

> IQCJ-SCHIP1 Gene Search Result


Gene Information
Gene Name IQCJ-SCHIP1
Gene ID 100505385
Gene Full Name IQCJ-SCHIP1 readthrough
Gene Alias -
Transcripts ENSG00000283154
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID B3KU38
HGNC ID HGNC:38842
Summary This locus represents naturally occurring read-through transcription from the neighboring IQ motif containing J (IQCJ) and schwannomin interacting protein 1 (SCHIP1) genes. Alternative splicing results in multiple transcript variants that are composed of in-frame exons from each individual gene. The resulting fusion products are thought to be components of the multimolecular complexes of axon initial segments and nodes of Ranvier, and they may play a role in calcium-mediated responses. [provided by RefSeq, Oct 2010]
Target gene [IQCJ-SCHIP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003372 chr3 89 22 53 164 View
6003373 chr3 89 22 53 164 View
6010672 chr3 27 3 0 30 View
6032459 chr3 0 0 0 0 View

Target gene [IQCJ-SCHIP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - IQCJ-SCHIP1 peak across samples

Peak Plot