HBV Target gene Detail Information

> ITGAD Gene Search Result


Gene Information
Gene Name ITGAD
Gene ID 3681
Gene Full Name integrin subunit alpha D
Gene Alias ADB2|CD11D
Transcripts ENSG00000156886
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info CD markers, Predicted membrane proteins
Uniport_ID Q13349
HGNC ID HGNC:6146
OMIM ID 602453
Summary This gene belongs to the beta-2 integrin family of membrane glycoproteins, which are are composed of non-covalently linked alpha and beta subunits to form a heterodimer. It encodes the alpha subunit of the cell surface heterodimers and is involved in the activation and adhesion functions of leukocytes. The gene is located about 11kb downstream of the integrin subunit alpha X gene, another member of the integrin family. It is expressed in the tissue and circulating myeloid leukocytes. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]
Target gene [ITGAD] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001017 chr16 1011 102 44 1157 View
1001913 chr16 251 90 91 432 View
1001914 chr16 251 90 91 432 View
1004471 chr16 42 33 6 81 View
1004832 chr16 58 10 0 68 View
1007165 chr16 24 6 0 30 View
1008631 chr16 3 15 2 20 View
1009701 chr16 8 6 1 15 View
1011136 chr16 6 4 0 10 View
1011137 chr16 6 4 0 10 View

Target gene [ITGAD] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94660 - ITGAD expression across samples

Volcano Plot

Bar Plot