HBV Target gene Detail Information

> KCNC2 Gene Search Result


Gene Information
Gene Name KCNC2
Gene ID 3747
Gene Full Name potassium voltage-gated channel subfamily C member 2
Gene Alias DEE103|KV3.2
Transcripts ENSG00000166006
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, FDA approved drug targets, Human disease related genes, Predicted membrane proteins, Voltage-gated ion channels
Uniport_ID Q96PR1
HGNC ID HGNC:6234
OMIM ID 176256
Summary The Shaker gene family of Drosophila encodes components of voltage-gated potassium channels and is comprised of four subfamilies. Based on sequence similarity, this gene is similar to one of these subfamilies, namely the Shaw subfamily. The protein encoded by this gene belongs to the delayed rectifier class of channel proteins and is an integral membrane protein that mediates the voltage-dependent potassium ion permeability of excitable membranes. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]
Target gene [KCNC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012018 chr12 2 6 0 8 View
1016023 chr12 0 2 0 2 View
1016024 chr12 0 2 0 2 View
1016027 chr12 0 2 0 2 View
1016028 chr12 0 2 0 2 View
1016031 chr12 0 2 0 2 View
1016032 chr12 0 2 0 2 View
1016033 chr12 0 2 0 2 View
1016037 chr12 0 2 0 2 View
1016039 chr12 0 2 0 2 View
1016048 chr12 0 2 0 2 View
1016053 chr12 0 2 0 2 View
1016115 chr12 2 0 0 2 View
1019083 chr12 0 0 0 0 View

Target gene [KCNC2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - KCNC2 peak across samples

Peak Plot


> Dataset: GSE270130 - KCNC2 peak across samples

Peak Plot


> Dataset: GSE131257 - KCNC2 peak across samples

Peak Plot