HBV Target gene Detail Information

> KCNIP4 Gene Search Result


Gene Information
Gene Name KCNIP4
Gene ID 80333
Gene Full Name potassium voltage-gated channel interacting protein 4
Gene Alias CALP|KCHIP4
Transcripts ENSG00000185774
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Predicted intracellular proteins, Transporters
Uniport_ID Q6PIL6
HGNC ID HGNC:30083
OMIM ID 608182
Summary This gene encodes a member of the family of voltage-gated potassium (Kv) channel-interacting proteins (KCNIPs), which belong to the recoverin branch of the EF-hand superfamily. Members of the KCNIP family are small calcium binding proteins. They all have EF-hand-like domains, and differ from each other in the N-terminus. They are integral subunit components of native Kv4 channel complexes. They may regulate A-type currents, and hence neuronal excitability, in response to changes in intracellular calcium. This protein member also interacts with presenilin. Multiple alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Target gene [KCNIP4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008549 chr4 19 1 0 20 View
1010272 chr4 7 1 5 13 View
1010354 chr4 1 7 4 12 View
1010983 chr4 1 4 5 10 View
1013579 chr4 2 3 0 5 View
1014719 chr4 2 1 0 3 View
1015145 chr4 1 2 0 3 View
1018761 chr4 0 0 0 0 View
1019571 chr4 0 0 0 0 View
1024391 chr4 10 70 39 119 View

Target gene [KCNIP4] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - KCNIP4 peak across samples

Peak Plot

> Dataset: GSE68402 - KCNIP4 peak across samples

Peak Plot

> Dataset: GSE270130 - KCNIP4 peak across samples

Peak Plot

> Dataset: GSE100400 - KCNIP4 peak across samples

Peak Plot

> Dataset: GSE131257 - KCNIP4 peak across samples

Peak Plot