HTLV1 Target gene Detail Information

> KDM5D Gene Search Result


Gene Information
Gene Name KDM5D
Gene ID 8284
Gene Full Name lysine demethylase 5D
Gene Alias HY|HYA|JARID1D|SMCY
Transcripts ENSG00000012817
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli fibrillar center;
Membrane Info Enzymes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9BY66
HGNC ID HGNC:11115
OMIM ID 426000
Summary This gene encodes a protein containing zinc finger domains. A short peptide derived from this protein is a minor histocompatibility antigen which can lead to graft rejection of male donor cells in a female recipient. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009]
Target gene [KDM5D] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022983 chrY 4 0 0 4 View

Target gene [KDM5D] related to Omics data
Data ID Experiment type Sample number Platform
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip