HTLV1 Target gene Detail Information

> LHFPL6 Gene Search Result


Gene Information
Gene Name LHFPL6
Gene ID 10186
Gene Full Name LHFPL tetraspan subfamily member 6
Gene Alias LHFP
Transcripts ENSG00000183722
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli;
Membrane Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q9Y693
HGNC ID HGNC:6586
OMIM ID 606710
Summary This gene is a member of the lipoma HMGIC fusion partner (LHFP) gene family, which is a subset of the superfamily of tetraspan transmembrane protein encoding genes. This gene is fused to a high-mobility group gene in a translocation-associated lipoma. Mutations in another LHFP-like gene result in deafness in humans and mice. Alternatively spliced transcript variants have been found; however, their full-length nature is not known. [provided by RefSeq, Jul 2008]
Target gene [LHFPL6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003144 chr13 39 33 107 179 View
6003589 chr13 63 32 57 152 View
6007923 chr13 33 4 13 50 View

Target gene [LHFPL6] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LHFPL6 peak across samples

Peak Plot