Gene Information
|
Gene Name
|
LHX5-AS1 |
|
Gene ID
|
104355219
|
|
Gene Full Name
|
LHX5 antisense RNA 1 |
|
Gene Alias
|
locus 4010|locus4010 |
|
Virus
|
HPV |
|
Gene Type
|
ncRNA |
|
HGNC ID
|
HGNC:49570
|
Target gene [LHX5-AS1] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5010214 |
chr12 |
7 |
0 |
0 |
7 |
View |
| 5011683 |
chr12 |
179 |
16 |
2 |
197 |
View |
| 5014908 |
chr12 |
128 |
31 |
19 |
178 |
View |
Target gene [LHX5-AS1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
M GSE169622
|
Methylation profiling (Array) |
9 |
Infinium MethylationEPIC |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - LHX5-AS1 expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
