HTLV1 Target gene Detail Information

> LINC00309 Gene Search Result


Gene Information
Gene Name LINC00309
Gene ID 150992
Gene Full Name long intergenic non-protein coding RNA 309
Gene Alias NCRNA00309
Transcripts ENSG00000230923
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:25279
lncRNASNP2 ID LINC00309
Target gene [LINC00309] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000603 chr2 826 206 116 1148 View

Target gene [LINC00309] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINC00309 peak across samples

Peak Plot