HPV Target gene Detail Information

> LINC00433 Gene Search Result


Gene Information
Gene Name LINC00433
Gene ID 100874168
Gene Full Name long intergenic non-protein coding RNA 433
Gene Alias LINC00560
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:42768
Target gene [LINC00433] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009772 chr13 2 0 0 2 View

Target gene [LINC00433] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC00433 peak across samples

Peak Plot