HTLV1 Target gene Detail Information

> LINC00540 Gene Search Result


Gene Information
Gene Name LINC00540
Gene ID 100506622
Gene Full Name long intergenic non-protein coding RNA 540
Gene Alias -
Transcripts ENSG00000276476
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:43673
Target gene [LINC00540] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011473 chr13 25 1 0 26 View

Target gene [LINC00540] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINC00540 peak across samples

Peak Plot