HPV Target gene Detail Information

> LINC00596 Gene Search Result


Gene Information
Gene Name LINC00596
Gene ID 102724845
Gene Full Name long intergenic non-protein coding RNA 596
Gene Alias C14orf165|CNSLT1I7G
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:23167
Summary Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINC00596] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001941 chr14 7 8 4 19 View

Target gene [LINC00596] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC00596 peak across samples

Peak Plot