HPV Target gene Detail Information

> LINC00680-GUSBP4 Gene Search Result


Gene Information
Gene Name LINC00680-GUSBP4
Gene ID 106660613
Gene Full Name LINC00680-GUSBP4 readthrough, transcribed pseudogene
Gene Alias -
Virus HPV
Gene Type pseudo
HGNC ID HGNC:56755
Summary This locus represents naturally-occurring readthrough transcription between the neighboring LINC00680 (long intergenic non-protein coding RNA 680) and GUSBP4 (glucuronidase, beta pseudogene 4) genes on chromosome 6. The readthrough transcript is unlikely to encode a protein. [provided by RefSeq, Oct 2015]
Target gene [LINC00680-GUSBP4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006602 chr6 16 0 0 16 View
5009722 chr6 29 0 0 29 View
5010705 chr6 40 0 0 40 View
5017728 chr6 77 0 0 77 View
5017729 chr6 99 0 0 99 View
5017730 chr6 99 0 0 99 View

Target gene [LINC00680-GUSBP4] related to Omics data
Data ID Experiment type Sample number Platform
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]