HPV Target gene Detail Information

> LINC01082 Gene Search Result


Gene Information
Gene Name LINC01082
Gene ID 100506542
Gene Full Name long intergenic non-protein coding RNA 1082
Gene Alias TCONS_00024492
Transcripts ENSG00000269186
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:49125
OMIM ID 614978
lncRNASNP2 ID LINC01082
Target gene [LINC01082] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010480 chr16 113 69 2 184 View
5011282 chr16 1 0 0 1 View

Target gene [LINC01082] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01082 peak across samples

Peak Plot