HTLV1 Target gene Detail Information

> LINC01239 Gene Search Result


Gene Information
Gene Name LINC01239
Gene ID 441389
Gene Full Name long intergenic non-protein coding RNA 1239
Gene Alias -
Transcripts ENSG00000234840
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:49796
lncRNASNP2 ID LINC01239
Target gene [LINC01239] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015394 chr9 14 0 0 14 View
6021802 chr9 5 0 0 5 View
6028663 chr9 1 0 0 1 View
6029582 chr9 1 0 0 1 View
6030110 chr9 0 1 0 1 View

Target gene [LINC01239] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINC01239 peak across samples

Peak Plot