HBV Target gene Detail Information

> LINC01246 Gene Search Result


Gene Information
Gene Name LINC01246
Gene ID 102800315
Gene Full Name long intergenic non-protein coding RNA 1246
Gene Alias -
Transcripts ENSG00000236172
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:49840
Target gene [LINC01246] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006953 chr2 31 1 0 32 View

Target gene [LINC01246] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LINC01246 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC01246 peak across samples

Peak Plot

> Dataset: GSE270130 - LINC01246 peak across samples

Peak Plot