HPV Target gene Detail Information

> LINC01262 Gene Search Result


Gene Information
Gene Name LINC01262
Gene ID 101928971
Gene Full Name long intergenic non-protein coding RNA 1262
Gene Alias TCONS_l2_00021807
Transcripts ENSG00000250739
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:50275
lncRNASNP2 ID LINC01262
Target gene [LINC01262] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009714 chr4 0 0 0 0 View
5011045 chr4 15 2 0 17 View
5011272 chr4 550 1050 50 1650 View
5011273 chr4 633 1251 55 1939 View

Target gene [LINC01262] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01262 peak across samples

Peak Plot