HPV Target gene Detail Information

> LINC01358 Gene Search Result


Gene Information
Gene Name LINC01358
Gene ID 101926925
Gene Full Name long intergenic non-protein coding RNA 1358
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:50589
Target gene [LINC01358] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005251 chr1 0 1 0 1 View
5005456 chr1 1 1 0 2 View

Target gene [LINC01358] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC01358 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC01358 peak across samples

Peak Plot