HPV Target gene Detail Information

> LINC01524 Gene Search Result


Gene Information
Gene Name LINC01524
Gene ID 101927700
Gene Full Name long intergenic non-protein coding RNA 1524
Gene Alias -
Transcripts ENSG00000234948
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:51228
lncRNASNP2 ID LINC01524
Target gene [LINC01524] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010460 chr20 12 0 1 13 View

Target gene [LINC01524] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01524 peak across samples

Peak Plot