Gene Information
|
Gene Name
|
LINC01611 |
|
Gene ID
|
105377880
|
|
Gene Full Name
|
long intergenic non-protein coding RNA 1611 |
|
Gene Alias
|
TCONS_l2_00025430 |
|
Transcripts
|
ENSG00000231776
|
|
Virus
|
HPV |
|
Gene Type
|
ncRNA |
|
HGNC ID
|
HGNC:51791
|
|
lncRNASNP2 ID
|
LINC01611
|
Target gene [LINC01611] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5011321 |
chr6 |
6 |
3 |
0 |
9 |
View |
Target gene [LINC01611] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE183048
|
Chip-seq |
24 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE169622
|
Methylation profiling (Array) |
9 |
Infinium MethylationEPIC |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - LINC01611 expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
