HPV Target gene Detail Information

> LINC01622 Gene Search Result


Gene Information
Gene Name LINC01622
Gene ID 285768
Gene Full Name long intergenic non-protein coding RNA 1622
Gene Alias -
Transcripts ENSG00000286785
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:27768
Target gene [LINC01622] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009048 chr6 111 27 6 144 View
5009049 chr6 4 0 0 4 View
5016094 chr6 204 36 10 250 View
5016095 chr6 5 0 0 5 View
5017708 chr6 10 10 0 20 View

Target gene [LINC01622] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC01622 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC01622 peak across samples

Peak Plot