HBV Target gene Detail Information

> LINC01707 Gene Search Result


Gene Information
Gene Name LINC01707
Gene ID 105378785
Gene Full Name long intergenic non-protein coding RNA 1707
Gene Alias -
Transcripts ENSG00000223883
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:52495
lncRNASNP2 ID LINC01707
Target gene [LINC01707] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016535 chr1 0 0 1 1 View
1016536 chr1 0 0 1 1 View

Target gene [LINC01707] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LINC01707 peak across samples

Peak Plot

> Dataset: GSE270130 - LINC01707 peak across samples

Peak Plot