HPV Target gene Detail Information

> LINC01720 Gene Search Result


Gene Information
Gene Name LINC01720
Gene ID 440704
Gene Full Name long intergenic non-protein coding RNA 1720
Gene Alias -
Transcripts ENSG00000231175
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52507
lncRNASNP2 ID LINC01720
Target gene [LINC01720] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5007053 chr1 9 1 0 10 View
5007458 chr1 8 3 0 11 View
5009870 chr1 12 9 4 25 View
5009871 chr1 26 76 11 113 View

Target gene [LINC01720] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC01720 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC01720 peak across samples

Peak Plot