HBV Target gene Detail Information

> LINC01833 Gene Search Result


Gene Information
Gene Name LINC01833
Gene ID 107985879
Gene Full Name long intergenic non-protein coding RNA 1833
Gene Alias K21.1|RP11-89
Transcripts ENSG00000259439
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:52644
lncRNASNP2 ID LINC01833
Summary Predicted to be involved in regulation of gene expression. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINC01833] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003908 chr2 74 7 21 102 View

Target gene [LINC01833] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - LINC01833 peak across samples

Peak Plot

> Dataset: GSE68402 - LINC01833 peak across samples

Peak Plot

> Dataset: GSE270130 - LINC01833 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC01833 peak across samples

Peak Plot