HBV Target gene Detail Information

> LINC01934 Gene Search Result


Gene Information
Gene Name LINC01934
Gene ID 101927156
Gene Full Name long intergenic non-protein coding RNA 1934
Gene Alias -
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:52757
Target gene [LINC01934] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001669 chr2 296 100 138 534 View
1001845 chr2 177 133 145 455 View
1001937 chr2 111 148 149 408 View
1007583 chr2 14 8 4 26 View
1008793 chr2 19 0 0 19 View
1012292 chr2 7 0 0 7 View
1041282 chr2 398 135 156 689 View
1041283 chr2 224 184 168 576 View
1041284 chr2 9 5 1 15 View

Target gene [LINC01934] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - LINC01934 peak across samples

Peak Plot

> Dataset: GSE100400 - LINC01934 peak across samples

Peak Plot

> Dataset: GSE131257 - LINC01934 peak across samples

Peak Plot