HPV Target gene Detail Information

> LINC01973 Gene Search Result


Gene Information
Gene Name LINC01973
Gene ID 400624
Gene Full Name long intergenic non-protein coding RNA 1973
Gene Alias -
Transcripts ENSG00000204283
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52800
lncRNASNP2 ID LINC01973
Target gene [LINC01973] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011935 chr17 109 49 0 158 View

Target gene [LINC01973] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01973 peak across samples

Peak Plot