HPV Target gene Detail Information

> LINC02140 Gene Search Result


Gene Information
Gene Name LINC02140
Gene ID 100996345
Gene Full Name long intergenic non-protein coding RNA 2140
Gene Alias -
Transcripts ENSG00000261803
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53000
lncRNASNP2 ID LINC02140
Target gene [LINC02140] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004896 chr16 14 2 0 16 View
5010533 chr16 6 0 0 6 View
5010816 chr16 23 11 72 106 View

Target gene [LINC02140] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC02140 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC02140 peak across samples

Peak Plot