HPV Target gene Detail Information

> LINC02325 Gene Search Result


Gene Information
Gene Name LINC02325
Gene ID 101929241
Gene Full Name long intergenic non-protein coding RNA 2325
Gene Alias -
Transcripts ENSG00000246084
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53245
lncRNASNP2 ID LINC02325
Target gene [LINC02325] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015029 chr14 1 0 0 1 View

Target gene [LINC02325] related to Omics data
Data ID Experiment type Sample number Platform
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - LINC02325 expression across samples

Volcano Plot


Bar Plot