HPV Target gene Detail Information

> LINC02465 Gene Search Result


Gene Information
Gene Name LINC02465
Gene ID 107986313
Gene Full Name long intergenic non-protein coding RNA 2465
Gene Alias -
Transcripts ENSG00000249618
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:53403
lncRNASNP2 ID LINC02465
Target gene [LINC02465] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015960 chr4 1 14 0 15 View

Target gene [LINC02465] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC02465 peak across samples

Peak Plot