HTLV1 Target gene Detail Information

> LINGO3 Gene Search Result


Gene Information
Gene Name LINGO3
Gene ID 645191
Gene Full Name leucine rich repeat and Ig domain containing 3
Gene Alias LERN2|LRRN6B
Transcripts ENSG00000220008
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Predicted membrane proteins
Uniport_ID P0C6S8
HGNC ID HGNC:21206
OMIM ID 609792
Summary Predicted to be located in membrane. Predicted to be active in extracellular matrix and extracellular space. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINGO3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6017860 chr19 3 4 3 10 View

Target gene [LINGO3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINGO3 peak across samples

Peak Plot