HBV Target gene Detail Information

> LNC-LBCS Gene Search Result


Gene Information
Gene Name LNC-LBCS
Gene ID 100506885
Gene Full Name lncRNA bladder and prostate cancer suppressor, hnRNPK interacting
Gene Alias LBCS
Transcripts ENSG00000228412
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:54418
Target gene [LNC-LBCS] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1018410 chr6 0 0 0 0 View
1043142 chr6 0 0 0 0 View

Target gene [LNC-LBCS] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - LNC-LBCS peak across samples

Peak Plot

> Dataset: GSE68402 - LNC-LBCS peak across samples

Peak Plot

> Dataset: GSE270130 - LNC-LBCS peak across samples

Peak Plot

> Dataset: GSE100400 - LNC-LBCS peak across samples

Peak Plot

> Dataset: GSE131257 - LNC-LBCS peak across samples

Peak Plot