HPV Target gene Detail Information

> LOC100506403 Gene Search Result


Gene Information
Gene Name LOC100506403
Gene ID 100506403
Gene Full Name -
Gene Alias -
Transcripts ENSG00000159216
Virus HPV
Gene Type ncRNA
HPA Location Info Nucleoplasm;Vesicles;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q01196
Target gene [LOC100506403] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010451 chr21 2 1 0 3 View
5010752 chr21 2 0 59 61 View
5011751 chr21 95 0 0 95 View
5011819 chr21 29 181 48 258 View
5011820 chr21 31 184 53 268 View

Target gene [LOC100506403] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LOC100506403 peak across samples

Peak Plot

> Dataset: GSE143026 - LOC100506403 peak across samples

Peak Plot