HTLV1 Target gene Detail Information

> LRFN2 Gene Search Result


Gene Information
Gene Name LRFN2
Gene ID 57497
Gene Full Name leucine rich repeat and fibronectin type III domain containing 2
Gene Alias FIGLER2|KIAA1246|SALM1
Transcripts ENSG00000156564
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Predicted membrane proteins
Uniport_ID Q9ULH4
HGNC ID HGNC:21226
OMIM ID 612808
Summary Predicted to be involved in modulation of chemical synaptic transmission and regulation of postsynapse organization. Predicted to be located in plasma membrane. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; cell surface; and postsynaptic density membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LRFN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006363 chr6 30 9 31 70 View
6014829 chr6 9 3 3 15 View
6024225 chr6 1 2 0 3 View

Target gene [LRFN2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LRFN2 peak across samples

Peak Plot