HPV Target gene Detail Information

> MINDY3 Gene Search Result


Gene Information
Gene Name MINDY3
Gene ID 80013
Gene Full Name MINDY lysine 48 deubiquitinase 3
Gene Alias C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042
Transcripts ENSG00000148481
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear membrane;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9H8M7
HGNC ID HGNC:23578
OMIM ID 611649
Summary The protein encoded by this gene contains a caspase-associated recruitment domain and may function in apoptosis. It has been identified as a tumor suppressor in lung and gastric cancers, and a polymorphism in the gene may be associated with gastric cancer risk. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Dec 2015]
Target gene [MINDY3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005507 chr10 1 2 0 3 View

Target gene [MINDY3] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - MINDY3 peak across samples

Peak Plot