HPV Target gene Detail Information

> MIR3945HG Gene Search Result


Gene Information
Gene Name MIR3945HG
Gene ID 731424
Gene Full Name MIR3945 host gene
Gene Alias -
Transcripts ENSG00000251230
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52002
lncRNASNP2 ID MIR3945HG
Target gene [MIR3945HG] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010787 chr4 1 12 0 13 View

Target gene [MIR3945HG] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE226620 scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - MIR3945HG peak across samples

Peak Plot

> Dataset: GSE143026 - MIR3945HG peak across samples

Peak Plot