HBV Target gene Detail Information

> MIR4457 Gene Search Result


Gene Information
Gene Name MIR4457
Gene ID 100616235
Gene Full Name microRNA 4457
Gene Alias mir-4457
Transcripts ENSG00000263670
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:41554
miRBase ID MI0016803
miRBase Name hsa-mir-4457
Summary microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Target gene [MIR4457] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000984 chr5 899 141 158 1198 View
1001043 chr5 875 93 141 1109 View
1016625 chr5 0 1 0 1 View
1020025 chr5 812 127 73 1012 View
1021348 chr5 21 4 0 25 View
1021820 chr5 42 11 0 53 View
1021911 chr5 69 1 0 70 View
1022126 chr5 39 2 0 41 View
1022178 chr5 58 0 0 58 View
1022289 chr5 44 98 1 143 View
1023439 chr5 20 1 0 21 View
1023478 chr5 21 25 14 60 View
1023689 chr5 46 0 0 46 View
1023704 chr5 89 3 0 92 View
1043021 chr5 56 5 0 61 View

Target gene [MIR4457] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE270130 - MIR4457 peak across samples

Peak Plot