Gene Information
Target gene [MIR548XHG] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5004946 |
chr21 |
3 |
1 |
0 |
4 |
View |
| 5005264 |
chr21 |
0 |
0 |
0 |
0 |
View |
| 5005429 |
chr21 |
0 |
3 |
3 |
6 |
View |
| 5006109 |
chr21 |
0 |
2 |
6 |
8 |
View |
| 5010199 |
chr21 |
0 |
0 |
0 |
0 |
View |
| 5010365 |
chr21 |
9 |
1 |
7 |
17 |
View |
| 5010430 |
chr21 |
0 |
0 |
0 |
0 |
View |
| 5010554 |
chr21 |
3 |
0 |
0 |
3 |
View |
Target gene [MIR548XHG] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
GSE140662
|
Expression array |
8 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE181805
|
Expression array |
25 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - MIR548XHG expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
