HPV Target gene Detail Information

> MIR9-3HG Gene Search Result


Gene Information
Gene Name MIR9-3HG
Gene ID 254559
Gene Full Name MIR9-3 host gene
Gene Alias BS-DRL1|LINC00925|lnc-FANCI-2
Transcripts ENSG00000255571
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:27388
lncRNASNP2 ID MIR9-3HG
Target gene [MIR9-3HG] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005213 chr15 8 2 0 10 View
5010714 chr15 25 1 0 26 View

Target gene [MIR9-3HG] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - MIR9-3HG expression across samples

Volcano Plot

Bar Plot