HTLV1 Target gene Detail Information

> NBPF25P Gene Search Result


Gene Information
Gene Name NBPF25P
Gene ID 101929780
Gene Full Name NBPF member 25, pseudogene
Gene Alias WI2-925H4.1
Transcripts ENSG00000291005
Virus HTLV1
Gene Type pseudo
HGNC ID HGNC:45046
Summary This gene is a member of the neuroblastoma breakpoint family (NBPF) which consists of dozens of recently duplicated genes primarily located in segmental duplications on human chromosome 1. This gene family has experienced its greatest expansion within the human lineage and has expanded, to a lesser extent, among primates in general. Members of this gene family are characterized by tandemly repeated copies of DUF1220 protein domains. Gene copy number variations in the human chromosomal region 1q21.1, where most DUF1220 domains are located, have been implicated in a number of developmental and neurogenetic diseases such as microcephaly, macrocephaly, autism, schizophrenia, cognitive disability, congenital heart disease, neuroblastoma, and congenital kidney and urinary tract anomalies. Altered expression of some gene family members is associated with several types of cancer. This gene family contains numerous pseudogenes. [provided by RefSeq, Sep 2013]
Target gene [NBPF25P] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002942 chr1 120 74 3 197 View
6014608 chr1 10 6 0 16 View
6022371 chr1 2 1 2 5 View
6026621 chr1 1 1 0 2 View
6026698 chr1 2 0 0 2 View
6031258 chr1 0 0 0 0 View

Target gene [NBPF25P] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NBPF25P peak across samples

Peak Plot