HTLV1 Target gene Detail Information

> NBPF8 Gene Search Result


Gene Information
Gene Name NBPF8
Gene ID 728841
Gene Full Name NBPF member 8
Gene Alias NBPF8P
Transcripts ENSG00000270231
Virus HTLV1
Gene Type protein-coding
HPA Location Info Primary cilium, Cytosol;Golgi apparatus, Vesicles, Microtubules, Cytokinetic bridge, Mid piece, Principal piece, End piece;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:31990
OMIM ID 613998
Summary This gene is a member of the neuroblastoma breakpoint family (NBPF) which consists of dozens of recently duplicated genes primarily located in segmental duplications on human chromosome 1. This gene family has experienced its greatest expansion within the human lineage and has expanded, to a lesser extent, among primates in general. Members of this gene family are characterized by tandemly repeated copies of DUF1220 protein domains. Gene copy number variations in the human chromosomal region 1q21.1, where most DUF1220 domains are located, have been implicated in a number of developmental and neurogenetic diseases such as microcephaly, macrocephaly, autism, schizophrenia, cognitive disability, congenital heart disease, neuroblastoma, and congenital kidney and urinary tract anomalies. Altered expression of some gene family members is associated with several types of cancer. This gene family contains numerous pseudogenes. [provided by RefSeq, Apr 2013]
Target gene [NBPF8] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010649 chr1 24 4 2 30 View
6013191 chr1 18 2 0 20 View
6013983 chr1 15 2 0 17 View
6028870 chr1 0 1 0 1 View

Target gene [NBPF8] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NBPF8 peak across samples

Peak Plot