HTLV1 Target gene Detail Information

> NIPSNAP2 Gene Search Result


Gene Information
Gene Name NIPSNAP2
Gene ID 2631
Gene Full Name nipsnap homolog 2
Gene Alias GBAS
Transcripts ENSG00000146729
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Predicted intracellular proteins
Uniport_ID O75323
HGNC ID HGNC:4179
OMIM ID 603004
Summary This gene encodes a member of the NipSnap family of proteins that may be involved in vesicular transport. The encoded protein is localized to mitochondria and plays a role in oxidative phosphorylation. A pseudogene of this gene is located on the long arm of chromosome 2. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Feb 2011]
Target gene [NIPSNAP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012933 chr7 20 1 0 21 View

Target gene [NIPSNAP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NIPSNAP2 peak across samples

Peak Plot