HTLV1 Target gene Detail Information

> NPHP3-ACAD11 Gene Search Result


Gene Information
Gene Name NPHP3-ACAD11
Gene ID 100532724
Gene Full Name NPHP3-ACAD11 readthrough (NMD candidate)
Gene Alias NPHP3
Transcripts ENSG00000274810
Virus HTLV1
Gene Type ncRNA
HPA Location Info
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:48351
Summary This locus represents naturally occurring read-through transcription between the neighboring NPHP3 (nephronophthisis 3, adolescent) and ACAD11 (acyl-CoA dehydrogenase family, member 11) genes on chromosome 3. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2011]
Target gene [NPHP3-ACAD11] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6018609 chr3 7 1 1 9 View

Target gene [NPHP3-ACAD11] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NPHP3-ACAD11 peak across samples

Peak Plot